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An introduction to scientific image data analysis using R


The statistical software package R is free software environment and language for statistical computing and graphics.

In this workshop it is demonstrated how this software can be used to facilitate the analysis of ImageJ image data with the advanced statistical methods available in R.

A first introduction to the R language with an overview of several useful R packages is given and how image data can effectively be transferred from ImageJ to R.

Finally it is shown how the R language can be used from within ImageJ for the analysis of complex image data in an image analysis workflow.


R, ImageJ, Statistical Analysis

Administrative data

Presenting author: Marcel Austenfeld
Organisation: eLK.Medien, University of Kiel


Hardware and Software Requirements: R and ImageJ (Fiji) installation, Internet access.
Knowledge of participant:

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